MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Escherichia coli
19428wD4_HM13
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 110
bases: 5,033,648 bps
CDS: 4,754
rRNA: 21
tRNA: 78
tmRNA: 1
Total number of protein coding genes annotated/found:
4,625
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5033|JADGMH010000052.1
MBF0792938.1
Genome Viewer
NA
AA
528/176
130-657
DUF2726 domain-containing protein
SEQF5033|JADGMH010000052.1
MBF0792939.1
Genome Viewer
NA
AA
252/84
1480-1229
hypothetical protein
SEQF5033|JADGMH010000052.1
MBF0792940.1
Genome Viewer
NA
AA
303/101
1819-1517
hypothetical protein
SEQF5033|JADGMH010000052.1
MBF0792941.1
Genome Viewer
NA
AA
660/220
2644-1985
peptidyl-arginine deiminase
SEQF5033|JADGMH010000097.1
MBF0792996.1
Genome Viewer
NA
AA
381/127
1-383
biotin/lipoyl-binding protein
SEQF5033|JADGMH010000024.1
MBF0792531.1
Genome Viewer
NA
AA
5004/1668
1-5006
autotransporter domain-containing protein
SEQF5033|JADGMH010000024.1
MBF0792532.1
Genome Viewer
NA
AA
867/289
5226-6092
pyridoxine 4-dehydrogenase
SEQF5033|JADGMH010000024.1
MBF0792533.1
Genome Viewer
NA
AA
606/202
6738-6133
FMN-dependent NADH-azoreductase
SEQF5033|JADGMH010000024.1
MBF0792534.1
Genome Viewer
NA
AA
3903/1301
6939-10841
ATP-dependent RNA helicase HrpA
SEQF5033|JADGMH010000024.1
MBF0792535.1
Genome Viewer
NA
AA
801/267
11114-11914
YdcF family protein
SEQF5033|JADGMH010000024.1
MBF0792536.1
Genome Viewer
NA
AA
1440/480
12111-13550
aldehyde dehydrogenase
SEQF5033|JADGMH010000024.1
MBF0792537.1
Genome Viewer
NA
AA
1002/334
14593-13592
type I glyceraldehyde-3-phosphate dehydrogenase
SEQF5033|JADGMH010000024.1
MBF0792538.1
Genome Viewer
NA
AA
531/177
14782-15312
cytochrome b561
SEQF5033|JADGMH010000024.1
MBF0792539.1
Genome Viewer
NA
AA
174/58
15557-15730
hypothetical protein
SEQF5033|JADGMH010000024.1
MBF0792540.1
Genome Viewer
NA
AA
141/47
15942-15802
Hok/Gef family protein
SEQF5033|JADGMH010000024.1
MBF0792541.1
Genome Viewer
NA
AA
924/308
17318-16395
LysR family transcriptional regulator
SEQF5033|JADGMH010000024.1
MBF0792542.1
Genome Viewer
NA
AA
1344/448
17535-18878
VOC family protein
SEQF5033|JADGMH010000024.1
MBF0792543.1
Genome Viewer
NA
AA
1656/552
19103-20758
glucan biosynthesis protein OpgD
SEQF5033|JADGMH010000024.1
MBF0792544.1
Genome Viewer
NA
AA
225/75
20898-21122
YdcH family protein
SEQF5033|JADGMH010000024.1
MBF0792545.1
Genome Viewer
NA
AA
540/180
21185-21724
50S ribosomal protein L7/L12-serine acetyltransferase
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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